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    <title>Edinburgh Human Metabolic Network</title>
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<a class="topnav" href="/search1">Search Data</a> | 
<a class="topnav" href="/sitemap.asp">Browse Data</a> | 
<a class="topnav" href="/sitemap.asp">Data Visualization</a> | 
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  <h1>EHMN: Edinburgh Human Metabolic Network</h1>
  <h2>Browse data</h2>
  <a href="/pathway/">Pathways</a> <br/>
  <a href="/reaction/">Reactions</a> <br/>
  <a href="/compound/">Compounds</a><br/>
  <a href="/gene/">Genes</a><br/>
  <h2>Search data</h2>
Search reactions, compounds and genes by reactionid, compound id or name, gene id or name, Uniprot ID (etc. P09172), EC number <br/>
related with a disease (eg. Parkinson disease) or targeted for the treatment of a disease or targeted by a drug<br/>
    <form action="" method="get">
    <label for="id_se"><b>Search by:</b></label><select name="se" id="id_se">
<option value="rea">reaction ID</option>
<option value="com">compound ID or name</option>
<option value="entrez">entrez gene ID or name</option>
<option value="hgen">HGNC or Ensembl ID</option>
<option value="uniprot">Uniprot ID</option>
<option value="ec">EC number</option>

<option value="dig">genes related with disease</option>
<option value="dita">taget for disease</option>
<option value="drug">targeted by drug</option>
</select>
<label for="id_sefor"><b>for:</b></label><select name="sefor" id="id_sefor">
<option value="rea">reactions</option>
<option value="com">compounds</option>
<option value="gene">genes</option>
</select>

<input type="text" name="seterm" id="id_seterm" /></br>
<table><tr><th><label for="id_pa">select pathways:</label></th><td><select multiple="multiple" name="pa" id="id_pa">
<option value="0">all</option>
<option value="1">Glycine, serine, alanine and threonine metabolism</option>
<option value="2">Histidine metabolism</option>
<option value="3">Lysine metabolism</option>
<option value="4">Methionine and cysteine metabolism</option>
<option value="5">Selenoamino acid metabolism</option>
<option value="6">Tryptophan metabolism</option>

<option value="7">Tyrosine metabolism</option>
<option value="8">Urea cycle and metabolism of arginine, proline, glutamate, aspartate and asparagine</option>
<option value="9">Valine, leucine and isoleucine degradation</option>
<option value="10">Aminosugars metabolism</option>
<option value="11">Butanoate metabolism</option>
<option value="12">Fructose and mannose metabolism</option>
<option value="13">Galactose metabolism</option>
<option value="14">Glycolysis and Gluconeogenesis</option>
<option value="15">Pentose phosphate pathway</option>

<option value="16">Propanoate metabolism</option>
<option value="17">TCA cycle</option>
<option value="18">Endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides by alpha-amylase</option>
<option value="19">N-Glycan biosynthesis</option>
<option value="20">O-Glycan biosynthesis</option>
<option value="21">Proteoglycan biosynthesis</option>
<option value="22">3-oxo-10R-octadecatrienoate beta-oxidation</option>
<option value="23">Androgen and estrogen biosynthesis and metabolism</option>
<option value="24">Arachidonic acid metabolism</option>

<option value="25">Bile acid biosynthesis</option>
<option value="26">C21-steroid hormone biosynthesis and metabolism</option>
<option value="27">D4&amp;E4-neuroprostanes formation</option>
<option value="28">De novo fatty acid biosynthesis</option>
<option value="29">Dimethyl-branched-chain fatty acid mitochondrial beta-oxidation</option>
<option value="30">Di-unsaturated fatty acid beta-oxidation</option>
<option value="31">Glycerophospholipid metabolism</option>
<option value="32">Glycosphingolipid biosynthesis - ganglioseries</option>

<option value="33">Glycosphingolipid biosynthesis - globoseries</option>
<option value="34">Glycosphingolipid biosynthesis - lactoseries</option>
<option value="35">Glycosphingolipid biosynthesis - neolactoseries</option>
<option value="36">Glycosphingolipid metabolism</option>
<option value="37">Glycosylphosphatidylinositol(GPI)-anchor biosynthesis</option>
<option value="38">Leukotriene metabolism</option>
<option value="39">Linoleate metabolism</option>
<option value="40">Lipoate metabolism</option>
<option value="41">Mono-unsaturated fatty acid beta-oxidation</option>

<option value="42">Omega-3 fatty acid metabolism</option>
<option value="43">Omega-6 fatty acid metabolism</option>
<option value="44">Phosphatidylinositol phosphate metabolism</option>
<option value="45">Prostaglandin formation from arachidonate</option>
<option value="46">Prostaglandin formation from dihomo gama-linoleic acid</option>
<option value="47">Putative anti-Inflammatory metabolites formation from EPA</option>
<option value="48">Saturated fatty acids beta-oxidation</option>
<option value="49">Squalene and cholesterol biosynthesis</option>
<option value="50">Trihydroxycoprostanoyl-CoA beta-oxidation</option>

<option value="51">Purine metabolism</option>
<option value="52">Pyrimidine metabolism</option>
<option value="53">Biopterin metabolism</option>
<option value="54">Phytanic acid peroxisomal oxidation</option>
<option value="55">Porphyrin metabolism</option>
<option value="56">Vitamin A (retinol) metabolism</option>
<option value="57">Vitamin B1 (thiamin) metabolism</option>
<option value="58">Vitamin B12 (cyanocobalamin) metabolism</option>
<option value="59">Vitamin B2 (riboflavin) metabolism</option>

<option value="60">Vitamin B3 (nicotinate and nicotinamide) metabolism</option>
<option value="61">Vitamin B5 - CoA biosynthesis from pantothenate</option>
<option value="62">Vitamin B6 (pyridoxine) metabolism</option>
<option value="63">Vitamin B9 (folate) metabolism</option>
<option value="64">Vitamin C metabolism</option>
<option value="65">Vitamin D3 (cholecalciferol) metabolism</option>
<option value="66">Vitamin E metabolism</option>
<option value="67">Vitamin H (biotin) metabolism</option>
<option value="68">Vitamin K metabolism</option>

<option value="69">Xenobiotics metabolism</option>
<option value="70">isolated</option>
</select></td>
<td><label for="id_lo"><b>select subcellular locations:</b></label></td><td><select multiple="multiple" name="lo" id="id_lo">
<option value="0">all</option>
<option value="1">extracellular</option>
<option value="2">cell part</option>
<option value="3">plasma membrane</option>
<option value="4">cytoplasm</option>
<option value="5">nucleus</option>
<option value="6">cytosol</option>
<option value="7">endoplasmic reticulum</option>
<option value="8">microsomes</option>
<option value="9">Golgi apparatus</option>
<option value="10">peroxisomes</option>
<option value="11">lysosomes</option>
<option value="12">mitochondria</option>
</tr></table>
    <input type="submit" value="Search">
    </form>
    {% if reactions %}
      <h1> {{nre}} reactions found</h1>
      <table cellspacing="0">
	    <thead>
		    <tr>
			    <th>Reactionid</th>
			    <th>Pathway</th>
			    <th>Reversibility</th>
			    <th>Equation</th>
	   	    </tr>
           </thead>
           <tbody>
              {% for rea in reactions %}
	      <tr>
		      <th><a href="../reaction/{{rea.reactionid}}/">{{ rea.reactionid}}</a></th>
		      <td>{{rea.pathway}}</td>
		      <td>{{rea.reversibility}}</td>
		      <td>{{rea.equation}}</td>
	      </tr>
             {% endfor %}
          </tbody>
      </table>
    {% endif %}
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			Site developed and maintained by Dr Hongwu Ma. Any comments, suggestions please send email to: hma2 AT staffmail.ed.ac.uk		
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<b>If you use EHMN in your research, please cite the following publication: <br/>
HW Ma, A Sorokin, A Mazein, A Selkov, E Selkov, O Demin, I Goryanin. (2007) <a href="http://www.nature.com/msb/journal/v3/n1/full/msb4100177.html">
The Edinburgh Human Metabolic Network reconstruction and its functional analysis</a>. Molecular Systems Biology, 3, 135.</b>
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